STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07505.1KEGG: ate:Athe_0895 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (534 aa)    
Predicted Functional Partners:
ADQ07506.1
KEGG: ate:Athe_0894 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
  
0.923
ADQ06206.1
KEGG: ate:Athe_2298 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein.
 
 
 0.842
ADQ06942.1
PFAM: secretion protein HlyD family protein; KEGG: ate:Athe_1515 secretion protein HlyD family protein.
  
 
 0.814
ecfA-2
ABC transporter related protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
    
0.777
ADQ06258.1
KEGG: csc:Csac_0701 hypothetical protein.
 
  
 0.766
ADQ05795.1
KEGG: csc:Csac_2571 hypothetical protein.
  
    0.758
ADQ06567.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.745
ADQ08000.1
KEGG: ate:Athe_0339 hypothetical protein.
  
     0.744
ADQ06128.1
Hypothetical protein; KEGG: csc:Csac_2638 PKD domain-containing protein.
  
     0.737
ADQ06255.1
KEGG: csc:Csac_0698 hypothetical protein.
  
     0.735
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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