STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07534.1KEGG: ate:Athe_0860 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (249 aa)    
Predicted Functional Partners:
ADQ07535.1
PFAM: cobalt transport protein; KEGG: ate:Athe_0859 cobalt transport protein.
 
 0.996
ADQ07537.1
PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: cac:CAC0771 cobalt transport protein CbiM.
 
 0.993
ADQ07536.1
KEGG: tte:TTE0248 hypothetical protein.
 
 0.989
ADQ06792.1
PFAM: cobalt transport protein; KEGG: ate:Athe_1686 cobalt transport protein.
 
 0.956
ADQ07569.1
KEGG: ate:Athe_0826 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
     0.742
ADQ06045.1
PFAM: BioY protein; KEGG: ate:Athe_2544 BioY protein.
   
 
 0.702
ADQ08270.1
PFAM: BioY protein; KEGG: ate:Athe_2725 BioY protein.
   
 
 0.702
ADQ06708.1
KEGG: ate:Athe_1767 protein of unknown function DUF1393.
   
 
 0.676
ADQ07533.1
PFAM: Quinolinate phosphoribosyl transferase; KEGG: csc:Csac_2681 nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family.
       0.630
ADQ06944.1
PFAM: ABC-2 type transporter; KEGG: ate:Athe_1512 ABC-2 type transporter.
 
      0.556
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.