STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07548.1PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0847 extracellular solute-binding protein family 1. (556 aa)    
Predicted Functional Partners:
ADQ07544.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_0851 binding-protein-dependent transport systems inner membrane component.
 
   0.845
ADQ06036.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_2552 binding-protein-dependent transport systems inner membrane component.
  
   0.823
ADQ07545.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_0850 binding-protein-dependent transport systems inner membrane component.
 
  
 0.746
ADQ06030.1
KEGG: csc:Csac_0293 hypothetical protein.
  
     0.727
ADQ06035.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_2553 binding-protein-dependent transport systems inner membrane component.
  
  
 0.675
ADQ05818.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_0086 binding-protein-dependent transport systems inner membrane component.
  
   0.638
ADQ06464.1
KEGG: ate:Athe_2029 ABC-type sugar transport system periplasmic component-like protein.
  
     0.634
ADQ08140.1
KEGG: csc:Csac_2415 hypothetical protein.
  
     0.634
ADQ07542.1
KEGG: ate:Athe_0853 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain.
 
     0.593
ADQ07547.1
KEGG: ate:Athe_0848 uroporphyrinogen-III decarboxylase-like protein.
 
     0.577
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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