STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07561.1KEGG: ate:Athe_0834 hypothetical protein. (170 aa)    
Predicted Functional Partners:
ADQ07034.1
KEGG: ate:Athe_1421 hypothetical protein.
 
     0.825
ADQ07560.1
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: ate:Athe_0835 glycosyl transferase family 4.
       0.782
ADQ07562.1
PFAM: MCP methyltransferase CheR-type; KEGG: ate:Athe_0833 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type.
       0.782
ADQ07035.1
KEGG: ate:Athe_1420 heat shock protein DnaJ domain protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein.
 
    0.745
ADQ07245.1
KEGG: ate:Athe_1196 precorrin-2 dehydrogenase.
  
     0.727
ADQ07563.1
PFAM: GCN5-related N-acetyltransferase; KEGG: ate:Athe_0832 GCN5-related N-acetyltransferase.
       0.712
ADQ07835.1
KEGG: ate:Athe_0528 hypothetical protein.
  
     0.671
ADQ06448.1
TIGRFAM: primosome, DnaD subunit; KEGG: ate:Athe_2045 primosome, DnaD subunit.
  
     0.630
ADQ07559.1
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: ate:Athe_0836 hypothetical protein.
 
     0.606
ADQ06709.1
KEGG: ate:Athe_1766 hypothetical protein.
  
     0.571
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.