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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Knowledge-based Evidence
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Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rhaATIGRFAM: L-rhamnose isomerase; KEGG: ate:Athe_0706 L-rhamnose isomerase; PFAM: L-rhamnose isomerase. (426 aa)    
Predicted Functional Partners:
ADQ07554.1
PFAM: Carbohydrate kinase, FGGY-like; KEGG: ate:Athe_0841 carbohydrate kinase FGGY.
 
 
 0.989
ADQ06407.1
PFAM: protein of unknown function DUF718; KEGG: bha:BH0806 hypothetical protein.
 
 
 0.795
uxaC
KEGG: ate:Athe_1402 glucuronate isomerase; PFAM: Glucuronate isomerase.
      
 0.725
ADQ07674.1
KEGG: ate:Athe_0705 transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR.
     
 0.716
ADQ07675.1
PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain protein; KEGG: ate:Athe_0704 transketolase central region.
 
     0.691
ADQ06402.1
L-fucose isomerase _2 domain protein; Catalyzes the conversion of L-arabinose to L-ribulose.
  
   
 0.568
ADQ07677.1
PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: ate:Athe_0702 catalytic domain of components of various dehydrogenase complexes.
     
 0.553
ADQ07676.1
KEGG: ate:Athe_0703 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region.
       0.533
ADQ06406.1
KEGG: dth:DICTH_0296 rhamnose ABC transporter, rhamnose-binding protein; TIGRFAM: rhamnose ABC transporter, periplasmic rhamnose-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator.
  
     0.462
ADQ08172.1
KEGG: ate:Athe_0149 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system EIIC.
   
  
 0.447
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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