Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ07687.1KEGG: ate:Athe_0692 protein of unknown function DUF964; Belongs to the UPF0342 family. (119 aa)    
Predicted Functional Partners:
ADQ07688.1
KEGG: ate:Athe_0691 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein.
       0.689
ADQ07686.1
PFAM: protein of unknown function UPF0182; KEGG: ate:Athe_0693 protein of unknown function UPF0182.
       0.677
ADQ07689.1
PFAM: protein of unknown function DUF107; KEGG: ate:Athe_0690 protein of unknown function DUF107.
       0.666
ADQ07690.1
KEGG: ate:Athe_0689 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1.
       0.616
ADQ07691.1
KEGG: ate:Athe_0688 hypothetical protein.
       0.505
ADQ07047.1
Transcriptional regulator, DeoR family; PFAM: putative sugar-binding domain protein; KEGG: ate:Athe_1407 transcriptional regulator, DeoR family.
  
   
 0.472
ADQ05787.1
KEGG: ate:Athe_0037 proton-coupled thiamine transporter YuaJ; TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ.
  
     0.471
ADQ06188.1
PFAM: protein of unknown function DUF1021; KEGG: ate:Athe_2403 protein of unknown function DUF1021.
  
    0.404
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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