Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07695.1PFAM: Protein of unknown function DUF2191; KEGG: ate:Athe_0684 hypothetical protein. (66 aa)    
Predicted Functional Partners:
ADQ07694.1
PFAM: PilT protein domain protein; KEGG: csc:Csac_1519 PilT domain-containing protein.
 
   0.990
ADQ07055.1
PFAM: PilT protein domain protein; KEGG: csc:Csac_1947 PilT domain-containing protein.
  
     0.427
ADQ07696.1
KEGG: fno:Fnod_1300 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer.
       0.410
ADQ07878.1
Addiction module toxin, Txe/YoeB family; KEGG: tpd:Teth39_1581 addiction module antitoxin; TIGRFAM: addiction module toxin, Txe/YoeB family; PFAM: plasmid stabilization system.
  
     0.400
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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