STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07714.1PFAM: Septum formation initiator; KEGG: ate:Athe_0652 septum formation initiator. (99 aa)    
Predicted Functional Partners:
ADQ07618.1
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 
 0.946
ADQ07627.1
PFAM: Septum formation initiator; KEGG: ate:Athe_0771 septum formation initiator.
    
 
 0.882
ADQ07713.1
PFAM: RNA binding S1 domain protein; KEGG: ate:Athe_0653 RNA binding S1 domain protein.
  
  
 0.826
ADQ07626.1
SMART: PASTA domain containing protein; TIGRFAM: stage V sporulation protein D; KEGG: ate:Athe_0772 stage V sporulation protein D; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein.
  
 
 0.801
ADQ07139.1
KEGG: ate:Athe_1304 penicillin-binding protein 2; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 0.785
rodA
Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.
   
 
 0.768
ADQ07621.1
KEGG: ate:Athe_0777 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.
   
 
 0.768
ADQ07716.1
PFAM: YabP family protein; KEGG: ate:Athe_0650 YabP family protein.
  
  
 0.715
ADQ07715.1
PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: ate:Athe_0651 hypothetical protein.
       0.608
ADQ06330.1
PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ate:Athe_2167 flagellar hook-length control protein.
  
     0.601
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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