Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ07716.1PFAM: YabP family protein; KEGG: ate:Athe_0650 YabP family protein. (91 aa)    
Predicted Functional Partners:
ADQ07453.1
TIGRFAM: stage III sporulation protein AC; KEGG: ate:Athe_0992 stage III sporulation protein AC.
  
  
 0.813
ADQ07172.1
PFAM: putative stage IV sporulation YqfD; KEGG: ate:Athe_1271 hypothetical protein.
 
   
 0.801
ADQ07715.1
PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: ate:Athe_0651 hypothetical protein.
       0.758
ADQ06558.1
PFAM: Sporulation stage II protein R; KEGG: ate:Athe_1953 hypothetical protein.
  
  
 0.741
ADQ07107.1
TIGRFAM: stage IV sporulation protein B; KEGG: ate:Athe_1336 stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB.
  
   
 0.739
ADQ07720.1
KEGG: ate:Athe_0646 hypothetical protein.
 
   
 0.738
ADQ06555.1
PFAM: GerA spore germination protein; KEGG: ate:Athe_1956 GerA spore germination protein.
  
     0.737
ADQ07439.1
KEGG: ate:Athe_1006 transcriptional regulator, AbrB family; TIGRFAM: stage V sporulation protein T; transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein.
 
     0.728
ADQ07452.1
KEGG: ate:Athe_0993 hypothetical protein.
  
  
 0.724
ADQ07717.1
KEGG: ate:Athe_0649 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
    0.723
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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