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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07798.1KEGG: ate:Athe_1197 transposase, IS605 OrfB family; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB; putative transposase IS891/IS1136/IS1341 family. (405 aa)    
Predicted Functional Partners:
ADQ06215.1
PFAM: transposase IS200-family protein; KEGG: ate:Athe_2706 transposase IS200-family protein.
 
  
 0.778
ADQ06007.1
KEGG: csc:Csac_2584 resolvase domain-containing protein; manually curated; PFAM: Resolvase domain.
 
    0.685
ADQ06092.1
KEGG: mar:MAE_11230 hypothetical protein.
  
     0.640
ADQ07799.1
PFAM: response regulator receiver; KEGG: tit:Thit_0615 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor.
       0.608
ADQ07800.1
KEGG: nth:Nther_2138 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
       0.496
ADQ07973.1
PFAM: extracellular solute-binding protein family 5; KEGG: csc:Csac_0261 extracellular solute-binding protein.
  
     0.406
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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