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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07808.1PFAM: lipolytic protein G-D-S-L family; KEGG: ate:Athe_0553 lipolytic protein G-D-S-L family. (214 aa)    
Predicted Functional Partners:
ADQ06017.1
KEGG: ate:Athe_2581 hypothetical protein.
  
 
 0.701
ADQ05951.1
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ate:Athe_2333 xylose isomerase domain protein TIM barrel.
  
     0.687
ADQ07809.1
KEGG: ate:Athe_0552 glucokinase, ROK family; TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein.
       0.679
ADQ07021.1
KEGG: ate:Athe_1434 hypothetical protein.
   
 
 0.601
ADQ06585.1
KEGG: ate:Athe_1930 hypothetical protein.
  
   
 0.568
ADQ06290.1
KEGG: ate:Athe_2213 esterase/lipase-like protein.
 
  
 0.567
ADQ06421.1
Alpha-L-fucosidase; PFAM: glycoside hydrolase family 29 (alpha-L-fucosidase); KEGG: ate:Athe_2072 alpha-L-fucosidase; SMART: glycoside hydrolase family 29 (alpha-L-fucosidase).
 
     0.506
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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