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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07821.1KEGG: ate:Athe_0541 spore coat protein, CotS family; TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase. (333 aa)    
Predicted Functional Partners:
ADQ07820.1
KEGG: ate:Athe_0542 hypothetical protein.
 
     0.948
ADQ07819.1
KEGG: ate:Athe_0543 spore coat protein, CotS family; TIGRFAM: spore coat protein, CotS family; PFAM: aminoglycoside phosphotransferase.
 
    
0.746
ADQ06258.1
KEGG: csc:Csac_0701 hypothetical protein.
  
  
 0.704
ADQ07766.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: ate:Athe_0602 DNA binding domain protein, excisionase family.
  
     0.654
ADQ06128.1
Hypothetical protein; KEGG: csc:Csac_2638 PKD domain-containing protein.
  
     0.640
ADQ08054.1
KEGG: ate:Athe_0246 hypothetical protein.
  
     0.640
ADQ07797.1
KEGG: ate:Athe_0560 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SH3 type 3 domain protein; SMART: Peptidoglycan-binding LysM.
 
   
 0.634
ADQ07598.1
Putative transcriptional regulator; PFAM: AAA-4 family protein; KEGG: ate:Athe_0799 putative transcriptional regulator.
  
     0.632
ADQ05866.1
KEGG: ate:Athe_0104 hypothetical protein.
  
     0.630
ADQ08019.1
KEGG: csc:Csac_0184 hypothetical protein.
  
     0.630
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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