Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ07863.1PFAM: protein of unknown function DUF327; KEGG: ate:Athe_0514 protein of unknown function DUF327. (148 aa)    
Predicted Functional Partners:
ADQ07861.1
PFAM: PSP1 domain protein; KEGG: ate:Athe_0516 PSP1 domain protein.
  
  
 0.815
ADQ07862.1
KEGG: ate:Athe_0515 DNA-directed DNA polymerase.
 
     0.805
ADQ07864.1
PFAM: protein of unknown function DUF970; KEGG: ate:Athe_0513 protein of unknown function DUF970.
  
    0.796
ADQ06799.1
TIGRFAM: Flagellar operon protein YvyF; KEGG: ate:Athe_1678 hypothetical protein.
 
     0.786
ADQ06800.1
KEGG: ate:Athe_1677 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein.
 
 
   0.774
ADQ06801.1
PFAM: FlgN family protein; KEGG: ate:Athe_1676 FlgN family protein.
 
     0.722
ADQ06354.1
PFAM: protein of unknown function DUF342; KEGG: ate:Athe_2143 protein of unknown function DUF342.
  
     0.700
ADQ06347.1
PFAM: type IV pilus assembly PilZ; KEGG: ate:Athe_2150 type IV pilus assembly PilZ.
  
     0.689
ADQ07866.1
PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: ate:Athe_0511 Orn/Lys/Arg decarboxylase major region.
  
    0.660
ADQ06326.1
KEGG: ate:Athe_2171 H+-transporting two-sector ATPase, E subunit.
  
     0.646
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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