Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ07882.1PFAM: Rubrerythrin; KEGG: ate:Athe_0477 rubrerythrin. (164 aa)    
Predicted Functional Partners:
ADQ05908.1
KEGG: csc:Csac_0363 hypothetical protein.
  
     0.661
ADQ07196.1
KEGG: ate:Athe_1246 hypothetical protein.
  
     0.661
ADQ07056.1
PFAM: Peptidoglycan-binding lysin domain; KEGG: csc:Csac_1946 peptidoglycan-binding LysM.
  
     0.651
ADQ08163.1
PFAM: Protein of unknown function DUF2078, membrane; KEGG: ate:Athe_0162 hypothetical protein.
  
     0.600
ADQ07559.1
PFAM: Lipoprotein LpqB, GerMN domain; KEGG: ate:Athe_0836 hypothetical protein.
  
     0.587
ADQ07336.1
PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1563 GCN5-related N-acetyltransferase.
  
     0.581
ADQ06258.1
KEGG: csc:Csac_0701 hypothetical protein.
  
    0.544
ADQ08272.1
KEGG: ate:Athe_2727 hypothetical protein.
  
     0.538
ADQ07522.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: ate:Athe_0879 hypothetical protein.
  
     0.536
ADQ06567.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.527
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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