STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ07891.1Alpha-galactosidase; KEGG: ate:Athe_0468 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D. (730 aa)    
Predicted Functional Partners:
ADQ06587.1
Beta-galactosidase; KEGG: ate:Athe_1927 beta-galactosidase; PFAM: Glycoside hydrolase family 42 domain protein; Beta-galactosidase trimerisation domain protein; Beta-galactosidase domain protein.
 
  
 0.951
ADQ07892.1
Glycosyl hydrolase family 32 domain protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.950
ADQ07538.1
PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 TIM barrel; KEGG: ate:Athe_0857 glycoside hydrolase family 2 sugar binding; Belongs to the glycosyl hydrolase 2 family.
 
 
 0.939
ADQ08158.1
KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
 
 0.931
ADQ06026.1
PFAM: glycoside hydrolase family 35; KEGG: scb:SCAB_20461 putative glycosyl hydrolase (family 35); Belongs to the glycosyl hydrolase 35 family.
 
  
 0.921
ADQ07337.1
PFAM: glycoside hydrolase family 4; KEGG: csc:Csac_1562 glycoside hydrolase family protein.
    
  0.903
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.741
ADQ07895.1
PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0055 extracellular solute-binding protein.
 
  
 0.602
ADQ07890.1
KEGG: tit:Thit_2290 hypothetical protein.
       0.520
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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