STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ08123.1KEGG: ate:Athe_0202 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase. (742 aa)    
Predicted Functional Partners:
ADQ08122.1
KEGG: ate:Athe_0203 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase.
 
    
0.844
ADQ08124.1
KEGG: ate:Athe_0201 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; iron dependent repressor.
 
  
 0.732
ADQ07505.1
KEGG: ate:Athe_0895 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
  
0.657
ADQ08125.1
TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: ate:Athe_0200 CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; 2-hydroxyglutaryl-CoA dehydratase D-component.
       0.446
ADQ08121.1
PFAM: protein of unknown function DUF296; KEGG: ate:Athe_0204 protein of unknown function DUF296.
       0.444
ADQ08126.1
PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: ate:Athe_0199 2-hydroxyglutaryl-CoA dehydratase D-component.
       0.430
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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