STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ08203.1PFAM: ABC-2 type transporter; KEGG: ate:Athe_2625 ABC-2 type transporter. (370 aa)    
Predicted Functional Partners:
ADQ08202.1
PFAM: ABC-2 type transporter; KEGG: csc:Csac_0514 ABC-2 type transporter.
 
    0.960
ADQ08201.1
KEGG: csc:Csac_0515 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.942
ADQ08204.1
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: csc:Csac_0511 putative signal transduction histidine kinase.
 
  
 0.831
ADQ06939.1
PFAM: nitroreductase; KEGG: ate:Athe_1518 nitroreductase.
  
  
 0.741
ADQ05942.1
PFAM: S-layer domain protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.695
ADQ06255.1
KEGG: csc:Csac_0698 hypothetical protein.
  
     0.687
ADQ06128.1
Hypothetical protein; KEGG: csc:Csac_2638 PKD domain-containing protein.
  
     0.676
ADQ06258.1
KEGG: csc:Csac_0701 hypothetical protein.
  
     0.667
ADQ05866.1
KEGG: ate:Athe_0104 hypothetical protein.
  
    0.660
ADQ06567.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.656
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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