STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ08209.1PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0506 hypothetical protein. (656 aa)    
Predicted Functional Partners:
ADQ08208.1
KEGG: csc:Csac_0507 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 
 0.987
ADQ08207.1
KEGG: csc:Csac_0508 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 
 0.917
ADQ08206.1
Two component transcriptional regulator, winged helix family; KEGG: csc:Csac_0509 two component transcriptional regulator; PFAM: transcriptional regulator domain protein; response regulator receiver; SMART: response regulator receiver.
 
     0.901
ADQ05972.1
KEGG: ate:Athe_2611 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein.
  
 
 0.786
ADQ06207.1
KEGG: csc:Csac_2447 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.694
ADQ06879.1
KEGG: ate:Athe_1583 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
 
 0.692
ADQ06880.1
PFAM: protein of unknown function DUF214; KEGG: ate:Athe_1582 protein of unknown function DUF214.
  
  
 0.515
ADQ07717.1
KEGG: ate:Athe_0649 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.
  
    0.506
ADQ08204.1
Putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: csc:Csac_0511 putative signal transduction histidine kinase.
 
   0.503
ADQ06206.1
KEGG: ate:Athe_2298 efflux transporter, RND family, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; biotin/lipoyl attachment domain-containing protein.
  
  
 0.501
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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