Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ADQ08269.1PFAM: protein of unknown function DUF324; KEGG: mfe:Mefer_0276 protein of unknown function DUF324. (361 aa)    
Predicted Functional Partners:
ADQ08266.1
PFAM: protein of unknown function DUF324; KEGG: tit:Thit_1354 protein of unknown function DUF324.
   
 
 0.953
ADQ08267.1
TIGRFAM: CRISPR-associated protein, Csx11 family; KEGG: tit:Thit_1355 CRISPR-associated protein, Csx11 family.
       0.794
ADQ08268.1
PFAM: protein of unknown function DUF324; KEGG: tit:Thit_1356 protein of unknown function DUF324.
       0.792
ADQ08264.1
KEGG: tit:Thit_1352 hypothetical protein.
       0.791
ADQ08265.1
KEGG: mfe:Mefer_0281 hypothetical protein.
       0.790
ADQ08251.1
KEGG: csc:Csac_0075 CRISPR-associated Csm1 family protein; TIGRFAM: CRISPR-associated protein, Csm1 family; PFAM: metal-dependent phosphohydrolase HD sub domain.
   
   0.765
ADQ08263.1
PFAM: Rhomboid family protein; KEGG: ate:Athe_2713 rhomboid family protein.
       0.460
ADQ08262.1
KEGG: ate:Athe_2712 protein of unknown function DUF114.
       0.419
Your Current Organism:
Caldicellulosiruptor hydrothermalis
NCBI taxonomy Id: 632292
Other names: C. hydrothermalis 108, Caldicellulosiruptor hydrothermalis 108, Caldicellulosiruptor hydrothermalis DSM 18901, Caldicellulosiruptor hydrothermalis str. 108, Caldicellulosiruptor hydrothermalis strain 108
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