STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ39650.1PFAM: iron permease FTR1; KEGG: ate:Athe_2602 iron permease FTR1. (239 aa)    
Predicted Functional Partners:
ADQ39651.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
       0.539
ADQ39820.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_0273 periplasmic binding protein.
   
  
 0.513
ADQ40327.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_1896 periplasmic binding protein.
   
  
 0.513
ADQ39718.1
PFAM: NikR nickel binding; KEGG: ate:Athe_0168 putative transcriptional regulator, CopG family.
   
  
 0.472
ADQ39822.1
KEGG: csc:Csac_0175 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
   
  
 0.472
ADQ40329.1
KEGG: ate:Athe_1894 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
   
  
 0.472
ADQ39649.1
Manually curated; TIGRFAM: regulatory protein, FmdB family; KEGG: ate:Athe_2603 regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB.
       0.444
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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