STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ40355.1KEGG: csc:Csac_2383 beta-lactamase superfamily hydrolase. (238 aa)    
Predicted Functional Partners:
ADQ40356.1
KEGG: csc:Csac_2382 GAF domain-containing protein; PFAM: GAF domain protein; SMART: GAF domain protein.
 
     0.831
ADQ40354.1
KEGG: csc:Csac_2384 diguanylate cyclase.
       0.737
ADQ41043.1
KEGG: ate:Athe_1520 hypothetical protein.
  
     0.651
ADQ40357.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1839 S-layer domain protein.
 
     0.627
ADQ40282.1
KEGG: ate:Athe_1944 fibronectin type III domain protein; PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein.
  
     0.562
ADQ40351.1
KEGG: csc:Csac_2386 putative adenylate/guanylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide TPR_1 repeat-containing protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; Tetratricopeptide repeat.
 
   
 0.443
ADQ40097.1
KEGG: ate:Athe_0542 hypothetical protein.
  
     0.441
ADQ42037.1
KEGG: ate:Athe_2747 hypothetical protein.
  
     0.435
ADQ41814.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.421
ADQ41445.1
PFAM: protein of unknown function DUF402; KEGG: ate:Athe_0748 protein of unknown function DUF402.
  
     0.414
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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