STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ41095.1PFAM: transposase IS4 family protein; KEGG: csc:Csac_2511 transposase, IS4 family protein. (567 aa)    
Predicted Functional Partners:
ADQ41096.1
KEGG: mco:MCJ_000130 hypothetical protein.
       0.421
ADQ41097.1
Hypothetical protein; Manually curated; KEGG: ate:Athe_0069 hypothetical protein.
       0.419
ADQ41465.1
KEGG: csc:Csac_0656 hypothetical protein.
  
     0.403
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.