STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ41472.1KEGG: ate:Athe_0600 two component transcriptional regulator, AraC family; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain. (546 aa)    
Predicted Functional Partners:
ADQ41473.1
Signal transduction histidine kinase, LytS; KEGG: ate:Athe_0599 putative sensor with HAMP domain; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
 
 
 0.977
ADQ39780.1
Integral membrane sensor signal transduction histidine kinase; KEGG: csc:Csac_0125 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
 
 
 0.906
ADQ41651.1
Integral membrane sensor signal transduction histidine kinase; KEGG: csc:Csac_0300 histidine kinase internal region; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
 
 
 0.895
ADQ41339.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ate:Athe_0852 putative sensor with HAMP domain; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein.
 
 
 0.890
ADQ40056.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ate:Athe_2056 putative sensor with HAMP domain; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein.
 
 
 0.889
ADQ41872.1
KEGG: csc:Csac_2508 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein.
 
 
  0.875
ADQ41474.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0598 extracellular solute-binding protein family 1.
 
     0.857
ADQ41475.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0597 extracellular solute-binding protein family 1.
 
     0.844
ADQ41476.1
KEGG: ate:Athe_0596 binding-protein-dependent transport systems inner membrane component; manually curated; PFAM: binding-protein-dependent transport systems inner membrane component.
 
    0.642
ADQ41477.1
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ate:Athe_0595 binding-protein-dependent transport systems inner membrane component.
 
     0.609
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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