STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ41602.1Helix-turn-helix domain protein; KEGG: ate:Athe_2483 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein. (144 aa)    
Predicted Functional Partners:
ADQ41603.1
Helix-turn-helix domain protein; KEGG: ate:Athe_2484 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.
 
     0.822
ADQ41601.1
PFAM: ATP-binding region ATPase domain protein; KEGG: hya:HY04AAS1_1139 hypothetical protein.
       0.491
ADQ41604.1
KEGG: ppp:PHYPADRAFT_104341 hypothetical protein.
       0.481
ADQ41605.1
PFAM: DnaB domain protein helicase domain protein; KEGG: aoe:Clos_2797 replicative DNA helicase.
       0.481
ADQ41606.1
Manually curated; KEGG: chy:CHY_0325 ATP-dependent Clp protease proteolytic subunit.
       0.481
ADQ41607.1
Hypothetical protein; KEGG: saf:SULAZ_1256 putative DNA double-strand break repair Rad50 ATPase.
       0.481
ADQ41600.1
KEGG: ate:Athe_2678 hypothetical protein.
       0.446
ADQ41608.1
KEGG: ate:Athe_2487 hypothetical protein.
       0.426
ADQ41609.1
KEGG: ate:Athe_2488 hypothetical protein.
       0.426
ADQ41610.1
KEGG: ate:Athe_2489 hypothetical protein.
       0.426
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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