Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ADQ40715.1 | ADQ42052.1 | Calkr_1207 | Calkr_2629 | TIGRFAM: methyltransferase; KEGG: ate:Athe_1226 methyltransferase; PFAM: Conserved hypothetical protein CHP00095. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.751 |
| ADQ40715.1 | rnpA | Calkr_1207 | Calkr_2630 | TIGRFAM: methyltransferase; KEGG: ate:Athe_1226 methyltransferase; PFAM: Conserved hypothetical protein CHP00095. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.422 |
| ADQ42050.1 | ADQ42051.1 | Calkr_2627 | Calkr_2628 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | 0.940 |
| ADQ42050.1 | ADQ42052.1 | Calkr_2627 | Calkr_2629 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.839 |
| ADQ42050.1 | mnmE | Calkr_2627 | Calkr_2626 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.721 |
| ADQ42050.1 | mnmG | Calkr_2627 | Calkr_2625 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.703 |
| ADQ42050.1 | rho | Calkr_2627 | Calkr_1052 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.515 |
| ADQ42050.1 | rnpA | Calkr_2627 | Calkr_2630 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.869 |
| ADQ42050.1 | rpmH | Calkr_2627 | Calkr_2631 | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | KEGG: ate:Athe_2763 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.640 |
| ADQ42051.1 | ADQ42050.1 | Calkr_2628 | Calkr_2627 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | 0.940 |
| ADQ42051.1 | ADQ42052.1 | Calkr_2628 | Calkr_2629 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | 0.927 |
| ADQ42051.1 | mnmE | Calkr_2628 | Calkr_2626 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. | 0.734 |
| ADQ42051.1 | mnmG | Calkr_2628 | Calkr_2625 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | Glucose inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family. | 0.808 |
| ADQ42051.1 | rho | Calkr_2628 | Calkr_1052 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.789 |
| ADQ42051.1 | rnpA | Calkr_2628 | Calkr_2630 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. | 0.955 |
| ADQ42051.1 | rpmH | Calkr_2628 | Calkr_2631 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | KEGG: ate:Athe_2763 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family. | 0.790 |
| ADQ42051.1 | secE | Calkr_2628 | Calkr_1563 | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation. | 0.977 |
| ADQ42052.1 | ADQ40715.1 | Calkr_2629 | Calkr_1207 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | TIGRFAM: methyltransferase; KEGG: ate:Athe_1226 methyltransferase; PFAM: Conserved hypothetical protein CHP00095. | 0.751 |
| ADQ42052.1 | ADQ42050.1 | Calkr_2629 | Calkr_2627 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | KEGG: ate:Athe_2759 single-stranded nucleic acid binding R3H domain protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein. | 0.839 |
| ADQ42052.1 | ADQ42051.1 | Calkr_2629 | Calkr_2628 | Protein of unknown function DUF37; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family. | Membrane protein insertase, YidC/Oxa1 family; KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein. | 0.927 |
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