STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ42057.1KEGG: ate:Athe_2767 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein. (373 aa)    
Predicted Functional Partners:
ADQ42056.1
KEGG: ate:Athe_2766 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
  
 0.956
ADQ42055.1
PFAM: GerA spore germination protein; KEGG: ate:Athe_2765 GerA spore germination protein.
 
  
 0.946
ADQ40272.1
PFAM: GerA spore germination protein; KEGG: ate:Athe_1956 GerA spore germination protein.
 
  
 0.817
ADQ40273.1
KEGG: ate:Athe_1955 spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.
 
  
 0.800
ADQ41394.1
KEGG: ate:Athe_0796 sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ.
  
     0.723
ADQ41692.1
Protein of unknown function DUF204; Probably functions as a manganese efflux pump.
  
    0.713
ADQ40403.1
KEGG: ate:Athe_1792 germination protein YpeB; TIGRFAM: germination protein YpeB; PFAM: Propeptide PepSY amd peptidase M4.
 
     0.706
ADQ40718.1
PFAM: nucleoside recognition domain protein; KEGG: ate:Athe_1229 nucleoside recognition domain protein.
  
     0.682
ADQ40494.1
PFAM: Sporulation stage III protein AE; KEGG: ate:Athe_0994 hypothetical protein.
  
     0.671
ADQ42058.1
KEGG: ate:Athe_2768 hypothetical protein.
       0.664
Your Current Organism:
Caldicellulosiruptor kristjanssonii
NCBI taxonomy Id: 632335
Other names: C. kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii DSM 12137, Caldicellulosiruptor kristjanssonii I77R1B, Caldicellulosiruptor kristjanssonii str. I77R1B, Caldicellulosiruptor kristjanssonii strain I77R1B
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