Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03670.1KEGG: ate:Athe_0105 D-xylose ABC transporter, periplasmic substrate-binding protein; TIGRFAM: D-xylose ABC transporter, periplasmic substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator. (351 aa)    
Predicted Functional Partners:
ADQ03672.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_0107 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
xylG
ABC transporter related protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
 0.969
ADQ03667.1
KEGG: ate:Athe_0101 monosaccharide-transporting ATPase.
  
  
 
0.910
ADQ05474.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ate:Athe_2264 periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.643
ADQ05475.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 0.613
ADQ03914.1
PFAM: inner-membrane translocator; KEGG: smd:Smed_3767 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
  
 0.548
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.419
ADQ03674.1
PFAM: inner-membrane translocator; KEGG: bbe:BBR47_06820 galactoside ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
     0.402
xylA
TIGRFAM: xylose isomerase; KEGG: ate:Athe_0603 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family.
 
  
 0.402
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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