STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03686.1KEGG: swo:Swol_1120 hypothetical protein. (1052 aa)    
Predicted Functional Partners:
ADQ03888.1
PFAM: glycosyl transferase family 2; KEGG: ate:Athe_0452 glycosyl transferase family 2.
 
     0.810
ADQ04222.1
KEGG: ate:Athe_0800 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; Tetratricopeptide TPR_3 repeat-containing protein; SMART: Tetratricopeptide repeat.
  
 
 0.806
ADQ05740.1
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS fold-3 domain protein; KEGG: ate:Athe_2740 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; extracellular solute-binding protein family 3; PAS domain containing protein; PAC repeat-containing protein.
 
  
 0.739
ADQ05722.1
KEGG: afl:Aflv_1210 hypothetical protein.
 
   
 0.607
ADQ03690.1
PFAM: polysaccharide deacetylase; KEGG: cac:CAC0358 xylanase/chitin deacetylase.
  
  
 0.557
ADQ05449.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: ate:Athe_2238 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
 
  
 0.527
ADQ03663.1
KEGG: ate:Athe_0089 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
 0.487
ADQ04206.1
PFAM: polysaccharide deacetylase; KEGG: csc:Csac_0205 polysaccharide deacetylase.
  
  
 0.487
ADQ04799.1
PFAM: polysaccharide deacetylase; KEGG: ate:Athe_1462 polysaccharide deacetylase.
  
  
 0.487
ADQ05119.1
PFAM: polysaccharide deacetylase; KEGG: ate:Athe_1829 polysaccharide deacetylase.
  
  
 0.487
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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