Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03690.1PFAM: polysaccharide deacetylase; KEGG: cac:CAC0358 xylanase/chitin deacetylase. (265 aa)    
Predicted Functional Partners:
ADQ03720.1
PFAM: extracellular solute-binding protein family 1; Carbohydrate binding family 6; KEGG: csc:Csac_2419 extracellular solute-binding protein.
  
     0.618
ADQ03724.1
KEGG: csc:Csac_2415 hypothetical protein.
  
     0.615
ADQ03723.1
PFAM: NHL repeat containing protein; KEGG: csc:Csac_2416 hypothetical protein.
 
     0.586
ADQ03689.1
SMART: alpha amylase catalytic sub domain; KEGG: ate:Athe_0143 alpha amylase catalytic sub domain protein.
     
 0.568
ADQ03729.1
Glycoside hydrolase family 43; KEGG: csc:Csac_2411 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate-binding CenC domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV.
  
   
 0.511
ADQ04270.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0849 extracellular solute-binding protein family 1.
 
     0.483
ADQ05665.1
KEGG: csc:Csac_0424 hypothetical protein.
 
   
 0.450
ADQ03994.1
PFAM: lipolytic protein G-D-S-L family; KEGG: ate:Athe_0553 lipolytic protein G-D-S-L family.
 
   
 0.415
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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