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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03701.1PFAM: glycosyl transferase family 2; KEGG: ate:Athe_0157 glycosyl transferase family 2. (283 aa)    
Predicted Functional Partners:
ADQ03700.1
PFAM: glycosyl transferase group 1; KEGG: ate:Athe_0156 glycosyl transferase group 1.
 
    0.826
ADQ03703.1
KEGG: ate:Athe_0159 hypothetical protein.
  
  
 0.774
ADQ03702.1
KEGG: ate:Athe_0158 hypothetical protein.
       0.773
ADQ03699.1
KEGG: ate:Athe_0155 hypothetical protein.
       0.685
ADQ03698.1
PFAM: glycosyl transferase family 2; KEGG: ate:Athe_0154 glycosyl transferase family 2.
       0.630
ADQ03649.1
TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: csc:Csac_2566 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase.
  
  
 0.460
ADQ05489.1
TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: cpr:CPR_0584 glycosyltransferase; PFAM: sugar transferase.
  
  
 0.460
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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