Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03731.1KEGG: ate:Athe_0184 xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 39. (501 aa)    
Predicted Functional Partners:
ADQ03734.1
PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2404 glycoside hydrolase family protein.
 
  
 
0.945
ADQ03732.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: ate:Athe_0185 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
 
  
 0.932
ADQ03730.1
Cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; KEGG: ate:Athe_0183 cellulose 1,4-beta-cellobiosidase; SMART: glycoside hydrolase family 10.
 
   
 0.824
xylA
TIGRFAM: xylose isomerase; KEGG: ate:Athe_0603 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel; Belongs to the xylose isomerase family.
    
 0.807
ADQ03735.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: csc:Csac_2405 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
 
  
 0.802
uxaC
KEGG: csc:Csac_1949 glucuronate isomerase; PFAM: Glucuronate isomerase.
     
 0.801
ADQ05245.1
PFAM: glycoside hydrolase family 4; KEGG: ate:Athe_2028 glycoside hydrolase family 4.
     
  0.800
ADQ05453.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; S-layer domain-containing protein; KEGG: dtu:Dtur_1715 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
  
 0.793
ADQ03729.1
Glycoside hydrolase family 43; KEGG: csc:Csac_2411 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate-binding CenC domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV.
 
   
 0.770
ADQ04077.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; Carbohydrate-binding CenC domain protein; KEGG: ate:Athe_0618 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10.
  
  
 0.763
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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