STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03735.1Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 10; KEGG: csc:Csac_2405 endo-1,4-beta-xylanase; SMART: glycoside hydrolase family 10. (471 aa)    
Predicted Functional Partners:
ADQ03734.1
PFAM: glycoside hydrolase family 39; KEGG: csc:Csac_2404 glycoside hydrolase family protein.
 
  
 0.830
ADQ05306.1
PFAM: S-layer domain-containing protein; FG-GAP repeat protein; KEGG: bsu:BSU07050 polysaccharide lyase; lipoprotein.
 
 
 
 0.828
ADQ03729.1
Glycoside hydrolase family 43; KEGG: csc:Csac_2411 carbohydrate-binding family 6 protein; PFAM: glycoside hydrolase family 43; Carbohydrate-binding CenC domain protein; Carbohydrate binding family 6; SMART: cellulose binding type IV.
 
   
 0.820
ADQ05311.1
KEGG: ate:Athe_2090 hypothetical protein.
 
 
 
 0.819
ADQ03731.1
KEGG: ate:Athe_0184 xylan 1,4-beta-xylosidase; PFAM: glycoside hydrolase family 39.
 
  
 0.802
ADQ05297.1
Ricin B lectin; KEGG: putative esterase; PFAM: Ricin B lectin; esterase; SMART: Ricin B lectin.
 
   0.802
ADQ04276.1
Alpha-glucuronidase; KEGG: ate:Athe_0854 alpha-glucuronidase; PFAM: Glycosyl hydrolase 67 middle domain protein; glycosyl hydrolase 67 C-teriminal domain protein.
 
   
 0.778
ADQ05565.1
PFAM: lipolytic protein G-D-S-L family; KEGG: ate:Athe_2325 lipolytic protein G-D-S-L family.
  
 
   0.770
ADQ03663.1
KEGG: ate:Athe_0089 endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; Carbohydrate binding family 6; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
   
 0.756
ADQ04205.1
KEGG: csc:Csac_0204 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 10; SMART: glycoside hydrolase family 10.
  
     0.753
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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