STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03739.1KEGG: ate:Athe_0193 hypothetical protein. (133 aa)    
Predicted Functional Partners:
ADQ03738.1
KEGG: ate:Athe_0192 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP.
       0.697
queC
exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).
       0.624
ADQ03741.1
PFAM: phosphoadenosine phosphosulfate reductase; KEGG: ate:Athe_0195 PP-loop domain protein; Belongs to the TtcA family.
 
     0.541
ADQ03740.1
PFAM: thiamineS protein; KEGG: ate:Athe_0194 thiamineS protein.
       0.527
ADQ04674.1
KEGG: ate:Athe_1320 hypothetical protein.
  
     0.434
ADQ05234.1
PFAM: GCN5-related N-acetyltransferase; KEGG: ate:Athe_1975 GCN5-related N-acetyltransferase.
  
     0.409
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.