Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03766.1KEGG: ate:Athe_0221 hypothetical protein. (311 aa)    
Predicted Functional Partners:
ADQ04008.1
KEGG: ate:Athe_0560 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SH3 type 3 domain protein; SMART: Peptidoglycan-binding LysM.
   
   0.489
ADQ04736.1
PFAM: Peptidoglycan-binding lysin domain; KEGG: ate:Athe_1391 peptidoglycan-binding LysM.
   
   0.489
ADQ05645.1
KEGG: ate:Athe_2402 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM.
   
   0.489
ADQ03764.1
KEGG: ate:Athe_0219 hypothetical protein.
       0.484
ADQ03765.1
KEGG: ate:Athe_0220 hypothetical protein.
       0.484
ADQ03761.1
Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: ate:Athe_0216 phage shock protein A, PspA.
  
  
 0.463
ADQ03762.1
Protein serine/threonine phosphatase; PFAM: Stage II sporulation protein E; KEGG: ate:Athe_0217 protein serine/threonine phosphatase; SMART: protein phosphatase 2C domain protein.
       0.409
ADQ03763.1
KEGG: ate:Athe_0218 stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D.
       0.409
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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