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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03768.1PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0123 DNA polymerase beta subunit. (144 aa)    
Predicted Functional Partners:
ADQ05584.1
PFAM: protein of unknown function DUF86; KEGG: ate:Athe_2344 protein of unknown function DUF86.
 
     0.772
ADQ05498.1
PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0229 DNA polymerase beta subunit.
  
     0.733
ADQ05410.1
PFAM: protein of unknown function DUF86; KEGG: ate:Athe_2194 protein of unknown function DUF86.
 
     0.725
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.696
ADQ05690.1
PFAM: DNA polymerase beta domain protein region; KEGG: tte:TTE2517 nucleotidyltransferase domain-containing protein.
  
     0.590
ADQ03794.1
KEGG: ate:Athe_0250 hypothetical protein.
 
     0.538
ADQ05603.1
KEGG: ate:Athe_2365 hypothetical protein.
 
    0.516
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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