Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ADQ03788.1KEGG: ate:Athe_0244 SpoIID/LytB domain protein; TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D. (580 aa)    
Predicted Functional Partners:
queA
S-adenosylmethionine/tRNA-ribosyltransferase- isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
       0.839
ADQ04387.1
AAA ATPase; KEGG: tit:Thit_1404 AAA ATPase; manually curated; SMART: AAA ATPase.
  
    0.721
ADQ05129.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1839 S-layer domain protein.
 
     0.660
ADQ05211.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_1943 S-layer domain protein.
  
     0.592
ADQ05581.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2341 S-layer domain protein.
  
     0.563
ADQ03873.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0438 S-layer domain protein.
  
    0.554
ADQ05516.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2303 S-layer domain protein.
  
     0.541
ADQ03790.1
KEGG: ate:Athe_0246 hypothetical protein.
       0.531
ADQ03736.1
Peptidase M23; KEGG: ate:Athe_0190 peptidase M23; PFAM: Peptidase M23; Peptidoglycan-binding lysin domain; G5 domain protein; SMART: Peptidoglycan-binding LysM.
 
   
 0.521
ADQ05674.1
KEGG: ate:Athe_2600 hypothetical protein.
  
     0.520
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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