Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03792.1PFAM: Conserved hypothetical protein CHP02678; KEGG: ate:Athe_0248 hypothetical protein. (407 aa)    
Predicted Functional Partners:
ADQ03793.1
KEGG: ate:Athe_0249 chromosome segregation ATPase-like protein.
 
 
   0.991
ADQ03791.1
PFAM: Conserved hypothetical protein CHP02677; KEGG: ate:Athe_0247 hypothetical protein.
 
 
   0.988
ADQ03794.1
KEGG: ate:Athe_0250 hypothetical protein.
 
     0.956
ADQ03790.1
KEGG: ate:Athe_0246 hypothetical protein.
   
   0.731
ADQ05603.1
KEGG: ate:Athe_2365 hypothetical protein.
 
 
   0.605
ADQ03650.1
KEGG: ate:Athe_0063 hypothetical protein.
 
 
   0.562
ADQ04486.1
KEGG: csc:Csac_1554 hypothetical protein.
   
   0.506
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
   
   0.506
ADQ03632.1
KEGG: dae:Dtox_3833 hypothetical protein.
   
   0.500
ADQ03654.1
KEGG: ate:Athe_0077 S-layer domain protein; PFAM: transglutaminase domain-containing protein; S-layer domain-containing protein; Ig domain protein group 1 domain protein; SMART: transglutaminase domain-containing protein.
   
   0.500
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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