STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03793.1KEGG: ate:Athe_0249 chromosome segregation ATPase-like protein. (1350 aa)    
Predicted Functional Partners:
ADQ03792.1
PFAM: Conserved hypothetical protein CHP02678; KEGG: ate:Athe_0248 hypothetical protein.
 
     0.960
ADQ03794.1
KEGG: ate:Athe_0250 hypothetical protein.
 
     0.960
ADQ03791.1
PFAM: Conserved hypothetical protein CHP02677; KEGG: ate:Athe_0247 hypothetical protein.
 
   
 0.948
scpA
Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.749
ADQ03790.1
KEGG: ate:Athe_0246 hypothetical protein.
       0.480
ADQ05585.1
PFAM: DNA polymerase beta domain protein region; KEGG: ate:Athe_2345 DNA polymerase beta domain protein region.
 
    0.434
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.