Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03800.1KEGG: csc:Csac_0175 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase. (254 aa)    
Predicted Functional Partners:
ADQ03799.1
PFAM: transport system permease protein; KEGG: csc:Csac_0174 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.988
ADQ03798.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_0273 periplasmic binding protein.
 
 
 0.980
ADQ05157.1
PFAM: transport system permease protein; KEGG: ate:Athe_1895 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.948
ADQ05158.1
PFAM: periplasmic binding protein; KEGG: ate:Athe_1896 periplasmic binding protein.
 
 
 0.915
ADQ03802.1
PFAM: formylmethanofuran dehydrogenase subunit E region; KEGG: csc:Csac_0177 formylmethanofuran dehydrogenase, subunit E region.
 
    0.836
ADQ03801.1
PFAM: Uncharacterised protein family UPF0066; KEGG: ate:Athe_0276 protein of unknown function UPF0066.
 
    0.755
ADQ05682.1
PFAM: protein of unknown function DUF214; KEGG: csc:Csac_0529 hypothetical protein.
 
 
    0.504
ADQ04249.1
KEGG: ate:Athe_0826 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
    0.416
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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