STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03816.1PFAM: protein of unknown function DUF159; KEGG: ate:Athe_0318 protein of unknown function DUF159; Belongs to the SOS response-associated peptidase family. (210 aa)    
Predicted Functional Partners:
ADQ03815.1
HAD-superfamily hydrolase, subfamily IIA; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.
  
    0.784
ADQ03814.1
PFAM: glycosyl transferase group 1; KEGG: ate:Athe_0316 glycosyl transferase group 1.
  
    0.730
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
 
     0.664
ADQ03813.1
KEGG: ate:Athe_0315 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR.
       0.467
ADQ03812.1
KEGG: ate:Athe_0314 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
  
    0.458
ADQ04372.1
PFAM: integrase family protein; KEGG: ate:Athe_1029 integrase family protein; Belongs to the 'phage' integrase family.
   
    0.449
ADQ04373.1
PFAM: integrase family protein; KEGG: tpd:Teth39_0030 phage integrase family protein; Belongs to the 'phage' integrase family.
   
    0.449
ADQ04735.1
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: csc:Csac_1945 site-specific tyrosine recombinase XerC; Belongs to the 'phage' integrase family.
   
    0.449
xerC
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.449
ADQ05192.1
PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: pth:PTH_2135 integrase; Belongs to the 'phage' integrase family.
   
    0.449
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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