STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03826.1PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_0342 major facilitator superfamily MFS_1. (418 aa)    
Predicted Functional Partners:
ADQ03824.1
UvrD/REP helicase; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.
 
    0.749
ADQ05607.1
KEGG: ate:Athe_2369 hypothetical protein.
  
     0.722
ADQ04600.1
KEGG: ate:Athe_1246 hypothetical protein.
  
     0.721
ADQ04901.1
KEGG: csc:Csac_0666 hypothetical protein.
  
     0.708
ADQ03728.1
PFAM: extracellular solute-binding protein family 1; KEGG: ate:Athe_0181 extracellular solute-binding protein family 1.
  
     0.697
ADQ04291.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: ate:Athe_0879 hypothetical protein.
  
     0.688
ADQ03727.1
PFAM: extracellular solute-binding protein family 1; KEGG: csc:Csac_2412 extracellular solute-binding protein.
  
     0.681
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.679
ADQ03645.1
KEGG: csc:Csac_2571 hypothetical protein.
  
     0.676
ADQ05665.1
KEGG: csc:Csac_0424 hypothetical protein.
  
     0.670
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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