Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03838.1KEGG: ate:Athe_0366 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH. (128 aa)    
Predicted Functional Partners:
ADQ03839.1
PFAM: protein of unknown function DUF1648; KEGG: cby:CLM_1496 hypothetical protein.
 
     0.921
ADQ03837.1
PFAM: protein of unknown function UCP033101; KEGG: ate:Athe_0365 hypothetical protein; Belongs to the V-ATPase proteolipid subunit family.
       0.778
ADQ05592.1
KEGG: ate:Athe_2352 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
  
     0.760
ADQ03840.1
KEGG: ate:Athe_0367 hypothetical protein.
       0.524
ADQ05591.1
KEGG: ate:Athe_2351 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.458
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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