Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03849.1PFAM: Radical SAM domain protein; KEGG: ate:Athe_0390 radical SAM domain protein. (331 aa)    
Predicted Functional Partners:
ADQ04138.1
KEGG: ate:Athe_0697 hypothetical protein.
  
     0.705
ADQ05607.1
KEGG: ate:Athe_2369 hypothetical protein.
  
     0.686
ADQ04145.1
PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain-containing protein; KEGG: ate:Athe_0704 transketolase central region.
 
   
 0.673
ADQ04137.1
PFAM: class II aldolase/adducin family protein; KEGG: ate:Athe_0696 class II aldolase/adducin family protein.
  
     0.604
ADQ03724.1
KEGG: csc:Csac_2415 hypothetical protein.
  
  
 0.602
ADQ04051.1
TIGRFAM: DNA binding domain protein, excisionase family; KEGG: ate:Athe_0602 DNA binding domain protein, excisionase family.
  
     0.602
ADQ04736.1
PFAM: Peptidoglycan-binding lysin domain; KEGG: ate:Athe_1391 peptidoglycan-binding LysM.
  
     0.582
ADQ03723.1
PFAM: NHL repeat containing protein; KEGG: csc:Csac_2416 hypothetical protein.
 
  
 0.580
ADQ03850.1
KEGG: ate:Athe_0391 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein.
       0.549
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.544
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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