STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03865.1KEGG: ate:Athe_0430 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin. (237 aa)    
Predicted Functional Partners:
ADQ04465.1
KEGG: ate:Athe_1080 cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin; copper amine oxidase-like domain-containing protein; SMART: cell wall hydrolase/autolysin.
  
  
 
0.927
ADQ04449.1
N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin; manually curated; KEGG: ate:Athe_1064 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin.
  
  
 
0.916
ADQ03866.1
Dipeptidase; KEGG: ate:Athe_0431 dipeptidase; TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein.
       0.782
ADQ05724.1
PFAM: Rhomboid family protein; KEGG: ate:Athe_2713 rhomboid family protein.
  
   0.714
ADQ03861.1
PFAM: peptidase U32; KEGG: ate:Athe_0426 peptidase U32.
 
     0.667
ADQ03864.1
PFAM: SNARE associated Golgi protein; KEGG: ate:Athe_0429 SNARE associated Golgi protein.
       0.638
ADQ03863.1
PFAM: ferredoxin; KEGG: ate:Athe_0428 ferredoxin.
       0.635
ADQ03859.1
Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.
     
 0.629
ADQ03862.1
KEGG: ate:Athe_0427 sporulation integral membrane protein YtvI; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118.
       0.618
ADQ03860.1
PFAM: metalloenzyme domain protein; KEGG: ate:Athe_0425 metalloenzyme domain protein.
       0.617
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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