Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ03881.1PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0218 DNA polymerase beta subunit. (107 aa)    
Predicted Functional Partners:
ADQ03882.1
TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: ate:Athe_0447 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein.
 
     0.651
ADQ05049.1
KEGG: csc:Csac_2306 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
     0.535
ADQ05386.1
PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: ate:Athe_2167 flagellar hook-length control protein.
  
     0.447
ADQ03973.1
KEGG: ate:Athe_0532 hypothetical protein.
  
     0.446
ADQ05692.1
PFAM: ABC-2 type transporter; KEGG: csc:Csac_0514 ABC-2 type transporter.
  
     0.432
ADQ03883.1
TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: ate:Athe_0448 pullulanase, type I; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
       0.422
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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