STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsDRbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose. (131 aa)    
Predicted Functional Partners:
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.997
ADQ03914.1
PFAM: inner-membrane translocator; KEGG: smd:Smed_3767 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.963
ADQ03911.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: monosacharide ABC transporter periplasmic monosacharide-binding protein.
 
  
 0.950
ADQ05474.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: ate:Athe_2264 periplasmic binding protein/LacI transcriptional regulator.
 
  
 0.914
ADQ05475.1
PFAM: inner-membrane translocator; KEGG: ate:Athe_2265 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.902
ADQ03913.1
KEGG: cro:ROD_05841 putative sugar ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.868
xylG
ABC transporter related protein; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
  
  
 0.737
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
  
 0.737
ADQ05478.1
KEGG: csc:Csac_0238 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
  
  
 0.737
ADQ03912.1
PFAM: periplasmic lipoprotein; KEGG: rlg:Rleg_4758 hypothetical protein.
       0.528
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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