STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ03933.1PFAM: Rubrerythrin; KEGG: ate:Athe_0477 rubrerythrin. (164 aa)    
Predicted Functional Partners:
ADQ04036.1
KEGG: ate:Athe_0587 hypothetical protein.
   
 
 0.786
ADQ05607.1
KEGG: ate:Athe_2369 hypothetical protein.
  
     0.674
ADQ04600.1
KEGG: ate:Athe_1246 hypothetical protein.
  
     0.643
ADQ04563.1
KEGG: ate:Athe_1209 hypothetical protein.
  
     0.606
ADQ05212.1
PFAM: Fibronectin type III domain protein; KEGG: ate:Athe_1944 fibronectin type III domain protein.
  
     0.593
ADQ04291.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: ate:Athe_0879 hypothetical protein.
  
     0.589
ADQ03826.1
PFAM: major facilitator superfamily MFS_1; KEGG: ate:Athe_0342 major facilitator superfamily MFS_1.
  
     0.587
ADQ04494.1
PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_1563 GCN5-related N-acetyltransferase.
  
     0.573
ADQ05582.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2342 S-layer domain protein.
  
     0.566
ADQ04736.1
PFAM: Peptidoglycan-binding lysin domain; KEGG: ate:Athe_1391 peptidoglycan-binding LysM.
  
     0.554
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.