Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04017.1PFAM: ANTAR domain protein; KEGG: ate:Athe_0569 response regulator receiver and ANTAR domain protein. (194 aa)    
Predicted Functional Partners:
ADQ04018.1
PFAM: peptidase C26; KEGG: ate:Athe_0570 peptidase C26.
       0.782
ADQ04019.1
PFAM: MscS Mechanosensitive ion channel; KEGG: ate:Athe_0571 MscS mechanosensitive ion channel.
       0.780
proS
prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]
 
     0.690
ADQ03964.1
PFAM: Extracellular ligand-binding receptor; KEGG: ate:Athe_0523 extracellular ligand-binding receptor.
  
 
 0.678
ADQ04733.1
PFAM: Extracellular ligand-binding receptor; KEGG: ate:Athe_1388 extracellular ligand-binding receptor.
  
 
 0.678
ispH
Hydroxymethylbutenyl pyrophosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
    0.659
ADQ04016.1
TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ate:Athe_0568 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region.
       0.588
atpD
ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.
   
    0.503
ADQ04021.1
Arylformamidase; KEGG: ate:Athe_0573 cyclase family protein; PFAM: cyclase family protein.
       0.458
ADQ05288.1
KEGG: ate:Athe_2068 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
  
  
 0.436
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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