Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADQ04054.1KEGG: ate:Athe_0604 hypothetical protein. (235 aa)    
Predicted Functional Partners:
leuS
KEGG: ate:Athe_1254 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.608
ADQ05415.1
PFAM: tRNA pseudouridine synthase D TruD; KEGG: ate:Athe_2197 tRNA pseudouridine synthase D TruD.
  
     0.563
ADQ04454.1
PFAM: protein of unknown function DUF1385; KEGG: ate:Athe_1069 protein of unknown function DUF1385.
   
    0.545
ADQ04055.1
KEGG: ate:Athe_0605 hypothetical protein.
       0.525
ADQ04053.1
PFAM: transposase IS4 family protein; KEGG: nth:Nther_1154 transposase IS4 family protein.
       0.512
ADQ03681.1
TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; KEGG: csc:Csac_0316 CRISPR-associated Cas5 family protein.
  
     0.468
glmS
Glucosamine/fructose-6-phosphate aminotransferase, isomerizing; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 
 0.467
ADQ04304.1
KEGG: csc:Csac_1919 hypothetical protein.
  
     0.456
argD
TIGRFAM: acetylornithine and succinylornithine aminotransferase; KEGG: ate:Athe_1837 acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
 
 0.436
ADQ05729.1
KEGG: ate:Athe_2729 hypothetical protein.
  
     0.431
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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