STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADQ04065.1PFAM: S-layer domain-containing protein; KEGG: ate:Athe_0608 S-layer domain protein. (547 aa)    
Predicted Functional Partners:
ADQ04064.1
Arabinogalactan endo-1,4-beta-galactosidase; KEGG: ate:Athe_0607 Ig domain protein; PFAM: glycosyl hydrolase 53 domain protein; Ig domain protein; Carbohydrate-binding CenC domain protein.
 
    0.800
ADQ05516.1
PFAM: S-layer domain-containing protein; KEGG: ate:Athe_2303 S-layer domain protein.
  
     0.733
ADQ04043.1
PFAM: glycoside hydrolase family 5; S-layer domain-containing protein; KEGG: ate:Athe_0594 cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
0.628
ADQ03643.1
PFAM: O-antigen polymerase; KEGG: ate:Athe_0051 O-antigen polymerase.
 
     0.524
ADQ04067.1
PFAM: glycoside hydrolase starch-binding; S-layer domain-containing protein; KEGG: ate:Athe_0610 glycoside hydrolase starch-binding.
 
    
0.518
ADQ05162.1
KEGG: ate:Athe_1900 hypothetical protein.
  
     0.512
ADQ04258.1
PFAM: Glycosyl transferase, family 4, conserved region; KEGG: ate:Athe_0835 glycosyl transferase family 4.
  
     0.481
ADQ04066.1
TIGRFAM: pullulanase, type I; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; glycoside hydrolase starch-binding; KEGG: ate:Athe_0609 pullulanase, type I; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family.
      0.421
ADQ05330.1
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
     0.414
Your Current Organism:
Caldicellulosiruptor owensensis
NCBI taxonomy Id: 632518
Other names: C. owensensis OL, Caldicellulosiruptor owensensis DSM 13100, Caldicellulosiruptor owensensis OL, Caldicellulosiruptor owensensis str. OL, Caldicellulosiruptor owensensis strain OL
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